Databases
http://utrdb.ba.itb.cnr.it/
A specialized database of 5' and 3' eukaryotic mRNA untranslated sequences
http://utrsite.ba.itb.cnr.it/
A specialized database of experimentally validated regulatory elements located in 5' and 3' eukaryotic mRNA untranslated sequences
http://mi.caspur.it/SpliceAidF/
A specialized database of splicing factors and their experimentally validated binding targets
http://mi.caspur.it/mitozoa/index.php
A curated database for comparative Mitogenomics in Metazoa
Software & Web Tools
http://itbtools.ba.itb.cnr.it/patsearch
Detects regular expression patterns and structural motifs in nucleotide sequences
http://159.149.160.51/modtools/
A tool for discovering over-represented nucleotide patterns in nucleotide sequences (i.e. transcription factor binding sites)
http://159.149.160.51/modtools/
A tool for the discovery of conserved sequence/structural motifs in unaligned RNA sequences
http://159.149.160.51/exalign/
A tool for comparative analysis of exon-intron gene structures
http://www.caspur.it/ExpEdit/
a tool for exploring human RNA editing in RNA-Seq experiments
http://genome.ufl.edu/genesig/
Alternative splicing isoform signature